Latest recommendations
Id | Title * | Authors * | Abstract * | Picture * ▲ | Thematic fields * | Recommender | Reviewers | Submission date | |
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30 Nov 2022
![]() Chemical effects on ecological interactions within a model-experiment loopDominique LAMONICA, Sandrine CHARLES, Bernard CLÉMENT, Christelle LOPES https://doi.org/10.1101/2022.05.24.493191A model-experiment loop to optimise data requirements for ecotoxicological risk assessment with mesocosmsRecommended by Volker Grimm based on reviews by Charles Hazlerigg and Peter VermeirenIn Ecotoxicology, the toxicity of chemicals is usually quantified for individuals under laboratory conditions, while in reality individuals interact with other individuals in populations and communities, and are exposed to conditions that vary in space and time. Micro- and mesocosm experiments are therefore used to increase the ecological realism of toxicological risk assessments. Such experiments are, however, labour-intensive, costly, and cannot, due to logistical reasons, implement all possible factors or interests (Henry et al. 2017). Moreover, as such experiments often include animals, the number of experiments performed has to be minimized to reduce animal testing as much as possible. Modelling has therefore been suggested to complement such experiments (Beaudoin et al. 2012). Still, the population models of the species involved need to be parameterized and can thus require a large amount of data. However, how much data are actually needed is usually unclear. Lamonica et al. (2022) therefore focus on the challenge of “taking the most of experimental data and reducing the amount of experiments to perform”. Their ultimate goal is to reduce the number of experiments to parameterize their model of a 3-species mesocosm, comprised of algae, duckweed, and water fleas, sufficiently well. For this, experiments with one, two or three species, with different cadmium concentrations and without cadmium, are performed and used to parameterize, using the Bayesian Monte Carlo Markov Chain (MCMC) method, the model. Then, different data sets omitting certain experiments are used for the same parameterization procedure to see which data sets, and hence experiments, might possibly be omitted when it comes to parameterizing a model that would be precise enough to predict the effects of a toxicant. The authors clearly demonstrate the added value of the approach, but also discuss limits to the transferability of their recommendations. Their manuscript presents a useful and inspiring illustration of how in the future models and experiments should be combined in an integrated, iterative process. This is in line with the current “Destination Earth” initiative of the European Commission, which aims at producing “digital twins” of different environmental sectors, where the continuous mutual updating of models and monitoring designs is the key idea. The authors make an important point when concluding that “data quality and design are more beneficial for modelling purpose than quantity. Ideally, as the use of models and big data in ecology increases […], modellers and experimenters could collaboratively and profitably elaborate model-guided experiments.” References Beaudouin R, Ginot V, Monod G (2012) Improving mesocosm data analysis through individual-based modelling of control population dynamics: a case study with mosquitofish (Gambusia holbrooki). Ecotoxicology, 21, 155–164. https://doi.org/10.1007/s10646-011-0775-1 Henry M, Becher MA, Osborne JL, Kennedy PJ, Aupinel P, Bretagnolle V, Brun F, Grimm V, Horn J, Requier F (2017) Predictive systems models can help elucidate bee declines driven by multiple combined stressors. Apidologie, 48, 328–339. https://doi.org/10.1007/s13592-016-0476-0 Lamonica D, Charles S, Clément B, Lopes C (2022) Chemical effects on ecological interactions within a model-experiment loop. bioRxiv, 2022.05.24.493191, ver. 6 peer-reviewed and recommended by Peer Community in Ecotoxicology and Environmental Chemistry. https://doi.org/10.1101/2022.05.24.493191 | Chemical effects on ecological interactions within a model-experiment loop | Dominique LAMONICA, Sandrine CHARLES, Bernard CLÉMENT, Christelle LOPES | <p style="text-align: justify;">We propose in this paper a method to assess the effects of a contaminant on a micro-ecosystem, integrating the population dynamics and the interactions between species. For that, we developed a dynamic model to desc... | ![]() | Aquatic ecotoxicology, Environmental risk assessment, Modelling, Species interactions-webs | Volker Grimm | Charles Hazlerigg, Peter Vermeiren | 2022-05-30 11:05:59 | View |
17 Mar 2025
Evaluating the Effects of Environmental Disturbances and Pesticide Mixtures on N-cycle related Soil Microbial EndpointsCamilla Drocco, Anja Coors, Marion Devers-Lamrani, Fabrice Martin-Laurent, Nadine Rouard, Aymé Spor https://doi.org/10.1101/2024.01.22.576671Impact of environmental disturbances and pesticides on soil microbial communities involved in the Nitrogen cyclingRecommended by Abdulsamie HananoSoil microbial communities play a crucial role in maintaining ecosystem health, driving key processes such as nutrient cycling, organic matter decomposition, and soil fertility. However, these microbial populations are highly sensitive to environmental changes and chemical stressors, including pesticides. The preprint "Evaluating the effects of environmental disturbances and pesticide mixtures on soil microbial endpoints," provides valuable insights into how soil microbial communities respond to environmental fluctuations and pesticide exposure (Drocco et al., 2025). By integrating experimental soil microcosms with targeted microbial assessments, the study offers a comprehensive view of the resilience and vulnerability of soil microbiota under multiple stress conditions. The study aimed to assess how temperature and humidity fluctuations, along with pesticide exposure, impact soil microbial communities. A total of 250 soil microcosms were subjected to three different environmental conditions: heat disturbance, high humidity simulating heavy rain, or a control with no disturbance. Following a three-day recovery period, the microcosms were exposed to different pesticide active ingredients—clopyralid (herbicide), cypermethrin (insecticide), and pyraclostrobin (fungicide)—either individually or in combination at standard (1x) and elevated (10x) agronomic doses. By evaluating microbial endpoints related to diversity and community structure, the researchers were able to determine how environmental disturbances and chemical exposure influence soil microbial functions (Bacmaga et al., 2015). Of particular interest was the focus on microbial guilds involved in nitrification, a critical process for soil nitrogen cycling and agricultural productivity (Dominati et al., 2010). The study’s findings reveal a complex interplay between environmental stressors and pesticide exposure on microbial communities. Some key observations showed that heat and high humidity significantly altered microbial diversity and composition before pesticide application. This suggests that climate-driven disturbances can precondition microbial communities, potentially influencing their subsequent responses to chemical exposure. Moreover, the pesticide effects depend on dose and combination, while individual pesticides had measurable impacts on microbial endpoints, their effects were amplified when applied in mixtures or at elevated doses. This underscores the importance of considering real-world pesticide applications, where mixtures are commonly used. Furthermore, the results indicate that the microbial guilds involved in nitrification appeared to be disproportionately affected by pesticide exposure, raising concerns about long-term soil fertility and nitrogen availability in treated soils. These findings have significant implications for sustainable agriculture and soil health management. Understanding how soil microbiota respond to environmental and chemical stressors can inform strategies to mitigate negative impacts, such as adopting precision agriculture techniques, improving pesticide formulations, and implementing soil conservation practices. Despite its valuable contributions, the study has some limitations. The controlled microcosm approach, while useful for isolating specific variables, may not fully capture the complexity of field conditions. Long-term effects of pesticide exposure were also not assessed, leaving questions about microbial recovery and ecosystem stability over extended periods. Future research should focus on field-based experiments and long-term monitoring to validate and expand on these findings. In conclusion, the current study highlights the intricate interactions between environmental stressors and pesticide exposure on soil microbial communities. By leveraging a robust experimental design and providing open-access data and statistical scripts, the research enhances our understanding of soil microbial dynamics and their implications for agricultural sustainability. As climate change and intensive pesticide use continue to shape soil ecosystems, such studies are essential for developing resilient and sustainable soil management practices. References Bacmaga, M., et al., 2015. Microbial and enzymatic activity of soil contaminated with a mixture of diflufenican + mesosulfuron-methyl + iodosulfuron-methyl-sodium. Environ Sci Pollut Res Int. 22: 643-56, https://doi.org/10.1007/s11356-014-3395-5 Dominati, E., et al., 2010. A framework for classifying and quantifying the natural capital and ecosystem services of soils. Ecological Economics. 69: 1858-1868, https://doi.org/10.1016/j.ecolecon.2010.05.002 Drocco, C., Coors, A., Devers-Lamrani, M., Martin-Laurent, F., Rouard, N., Spor A. 2025. Evaluating the Effects of Environmental Disturbances and Pesticide Mixtures on N-cycle related Soil Microbial Endpoints. ver.3 peer-reviewed and recommended by PCI Ecotoxicology and Environmental Chemistry, https://doi.org/10.1101/2024.01.22.576671 | Evaluating the Effects of Environmental Disturbances and Pesticide Mixtures on N-cycle related Soil Microbial Endpoints | Camilla Drocco, Anja Coors, Marion Devers-Lamrani, Fabrice Martin-Laurent, Nadine Rouard, Aymé Spor | <p>Pesticides are widely used in conventional agriculture, either applied separately or in combination during the culture cycle. Due to their occurrence and persistence in soils, pesticide residues may have an impact on soil microbial communities ... | Environmental risk assessment, Microbial ecotoxicology, Terrestrial ecotoxicology | Abdulsamie Hanano | 2024-01-25 07:52:47 | View | ||
17 Dec 2024
![]() Exposure of wild mammals to glyphosate, AMPA, and glufosinate: a case for “emerging organic contaminants”?Clémentine Fritsch https://hal.science/hal-04485797The widespread detection of glyphosate, AMPA, and glufosinate in rodents and shrews from French agricultural landscapes underscores significant concerns about their potential toxicological impacts in non-target organismsRecommended by Pierre Labadie based on reviews by Sabrina Tartu and 3 anonymous reviewersPesticides give rise to considerable concern due to their impact on biodiversity. Amongst the vast range of compounds used as herbicides, glyphosate (GLY) is the most widely applied one at global scale and its transformation product, aminomethylphosphonic acid (AMPA) is also ubiquitous. However, the toxicity of these chemicals on non-target organisms, including mammals, is somewhat overlooked (Kissane et al., 2017). Beside these two chemicals, Fritsch et al. (2024) also considered another organophosphorus herbicide, i.e. glufosinate (GLUF). Their study examined exposure levels in rodents and shrews living in contrasted cropped and semi-natural habitats in France – i.e., conventional farmland, organic fields, and hedgerows – through the analysis of herbicide residues in their hair. The hypothesis that herbicide residues in hair reflect the exposure to multiple pesticides in wildlife is supported by several papers (i.e. Krief et al. 2017; Fritsch et al. 2022). Results obtained by Fritsch et al. (2024) indicated that the target compounds were widespread in the investigated environments, i.e. GLY, AMPA, and GLUF were detected in 64%, 51%, and 44% of samples, respectively. Diet appeared as a major driver of contamination, as herbivorous and omnivorous voles exhibited higher contamination levels than insectivorous or omnivorous species such as shrews and wild mice. In addition, habitat was also a significant factor: GLY concentrations were particularly high in individuals collected from hedgerows, surpassing those found in crop fields. This unexpected result highlights the contamination of areas considered as ecological refuges for the investigated species. Exposure levels did not show clear differences across sites, based on farming practices or pesticide application intensity. In addition, the measured concentrations of GLY (median 2.7 pg/mg), AMPA (median 1.4 pg/mg), and GLUF (median 3.5 pg/mg) frequently reached thresholds associated with toxic effects on small mammals. In worst case scenarios, exceedance percentages attained values as high as 94 %. Altogether, these results definitely raise concerns about the potential impact of GLY, AMPA and GLUF on non-target wildlife species and populations. These findings by Fritsch et al. (2024) therefore emphasize the widespread presence of these chemicals in agricultural landscapes and question the safety of herbicide use, even in habitats meant to protect biodiversity. This study underscores the need for more comprehensive evaluation of the ecological effects of herbicides to guide policy and conservation efforts.
References Kissane Z, Shephard JM (2017) The rise of glyphosate and new opportunities for biosentinel early-1068 warning studies. Conservation Biology 31: 1293–1300; https://doi.org/10.1111/cobi.12955 Krief S, Berny P, Gumisiriza F, Gross R, Demeneix B, Fini JB, et al. (2017) Agricultural expansion as risk to endangered wildlife: Pesticide exposure in wild chimpanzees and baboons displaying facial dysplasia. Science of the Total Environment 598:647–656; 1072; https://doi.org/10.1016/j.scitotenv.2017.04.113 Fritsch C, Appenzeller BM, Burkart L, Coeurdassier M, Scheifler R, Raoul F, et al. (2022) Pervasive exposure 1041 of wild small mammals to legacy and currently used pesticide mixtures in arable landscapes. 1042 Sci Rep 12:15904; https://doi.org/10.1038/s41598-022-19959-y Fritsch C, Appenzeller BM, Bertrand C, Coeurdassier M, Driget V, Hardy EM, Palazzi P, et al. (2024) Exposure of wild mammals to glyphosate, AMPA, and glufosinate: a case for “emerging organic contaminants”?. HAL, ver.3 peer-reviewed and recommended by PCI Ecotoxicology and Environmental Chemistry https://hal.science/hal-04485797 | Exposure of wild mammals to glyphosate, AMPA, and glufosinate: a case for “emerging organic contaminants”? | Clémentine Fritsch | <p>Glyphosate (GLY) is the most widely used herbicide worldwide, and its use continues to increase. Accumulating evidence shows that GLY and its metabolite aminomethylphosphonic acid (AMPA) are more persistent and toxic than expected, but little i... | ![]() | Bioaccumulation/biomagnification, Biomonitoring, Environmental pollution, Environmental risk assessment, Legacy and emerging contaminants | Pierre Labadie | 2024-03-01 15:15:54 | View | |
04 Mar 2024
![]() Ivermectin resistance in dung beetles exposed for multiple generationsDaniel Gonzalez Tokman, Antonio Arellano Torres, Fernanda Baena-Diaz, Carlos Bustos, Imelda Martinez M https://doi.org/10.1101/2023.05.08.539900Low potential of arthropod species to aquire resistance to invermectin drug could induce a risk of extinction in contaminated pasturesRecommended by Christian MouginFor many decades, the macrocyclic lactone drug ivermectin is extensively used in veterinary medicine and agriculture, as well as human medicine. Residues of ivermectin excreted in cattle dung remain persistent in soils (Mougin et al., 2003), biologically active and threaten non-target soil and coprophagous organisms such as dung flies and beetles (Lumaret et al., 2012). Ivermectin affects highly beneficial and taxonomically diverse groups inhabiting dung pats, including flies, parasitic wasps, as well as coprophilus and predatory dung beetles (Villar et al., 2022). Ivermectin resistance is well document in insects, but it seems to take longer and to be less effective than resistance to insecticides or other antiparasitic drugs, because of different physiological mechanisms involved in resistance (Seaman et al., 2015). In that context, Gonzalez-Tokman et al. (2024) compared the reproductive success of a line of dung beetles (Euoniticellus intermedius, Scarabaeinae) exposed to a moderate concentration of invermectin during 18 generations, and a control line of beatles that was maintained free of antiparasitic drug. They carried-out toxicity experiments with increasing ivermectin concentrations to determine if sensitivity to ivermectin was reduced after some generations of exposure, possibly by acquiring resistance by means of transgenerational effects. Thus, dung beetles did not generate resistance to ivermectin after 18 generations of continuous exposure, and quantitative genetic analyses showed only low genetic variation in response to ivermectin. The results published by Gonzalez-Tokman et al. (2024) indicated a low potential of beetles for adaptation to the drug, and suggest for non-target invertebrate groups a possible risk of extinction in ivermectin-contaminated pastures. These effects can greatly impact grassland ecology, lower their quality and reduce the area available and palatable to livestock. References Mougin, C., Kollmann, A., Dubroca, J., Ducrot, P.-H., Alvinerie, M., Galtier, P., 2003. Fate of the veterinary medicine ivermectin in soil. Environ. Chem. Letters 1, 131-134. https://doi.org/10.1007/s10311-003-0032-9 Lumaret, JP., Errouissi, F., Floate, K., Römbke, J., Wardhaugh, K., 2012. A review on the toxicity and non-target effects of macrocyclic lactones in terrestrial and aquatic environments. Current Pharmaceutical Biotechnology 13(6), 1004-60. https://doi.org/10.2174/138920112800399257 Villar, D., & Schaeffer, D.J., 2022. Ivermectin use on pastured livestock in Colombia: parasite resistance and impacts on the dung community. Revista Colombiana De Ciencias Pecuarias, 36(1), 3-12. https://doi.org/10.17533/udea.rccp.v36n1a2 Seaman, J.A., Alout, H., Meyers, J.I., Stenglein, M.D., Dabiré, R.K., Lozano-Fuentes, S., Burton, T.A., 471 Kuklinski, W.S., Black, W.C., Foy, B.D., 2015. Age and prior blood feeding of Anopheles gambiae influences their susceptibility and gene expression patterns to ivermectin-containing blood meals. BMC Genomics 16, 797. https://doi.org/10.1186/s12864-015-2029-8 González-Tokman, D., Arellano-Torres, A., Baena-Díaz, F., Bustos, C., Martínez M., I., 2024. Ivermectin resistance in dung beetles exposed for multiple generations, bioRxiv ver. 3 peer-reviewed and recommended by Peer Community in Ecotoxicology and Environmental Chemistry. https://doi.org/10.1101/2023.05.08.539900 | Ivermectin resistance in dung beetles exposed for multiple generations | Daniel Gonzalez Tokman, Antonio Arellano Torres, Fernanda Baena-Diaz, Carlos Bustos, Imelda Martinez M | <p>Ivermectin is an antiparasitic drug commonly used in cattle, that is excreted in dung, causing lethal and sub-lethal effects on coprophagous non-target fauna. Given that cattle parasites generate resistance to ivermectin, farmers have increased... | ![]() | Ecosystem Health, Environmental pollution, Global changes, Terrestrial ecotoxicology | Christian Mougin | 2023-05-12 04:57:32 | View | |
25 Sep 2023
![]() Characterization of the bioaccumulation and toxicity of copper pyrithione, an antifouling compound, on juveniles of rainbow troutCharlotte Bourdon, Jérôme Cachot, Patrice Gonzalez, Patrice Couture https://doi.org/10.1101/2023.01.31.526498Bioaccumulation and impact of copper pyrithione impact in juveniles of rainbow troutRecommended by Claudia CosioOur ability to anticipate and estimate how pollution affects biota is intrumental in the field of ecotoxicology. Impact of chemical pollution by metals, drugs or pesticides was widely studied in different species using acute and chronic scenarios. Since the ban on tributyltin in antifouling paints, other copper (Cu)-based paints are on the market, including a new generation of booster biocides:metal pyrithiones such as Cu pyrithione (CuPT). Pyrithione acts as a Cu ionophore facilitating Cu transport across the membranes. Although some data show their occurrence in aquatic ecosystems and few studies on the toxicity of CuPT in fish are published, major gaps in knowledge remain about their toxicity and toxic pathway. Few studies were previously conducted in animals exposed to CuPT pointing to reprotoxicity, developmental malformation and mortality (Li et al. 2021, Mochida et al., 2011; Mohamat-Yusuff et al., 2018, Shin et al., 2022). However, its toxicokinetic and toxicodynamic remain to be characterized in details. In this context, Bourdon et al. (2023) compared in juveniles of rainbow trout (Oncorhynchus mykiss), the effects of exposure to CuPT and ionic Cu2+ at equivalent Cu2+ molar concentrations. Presented data allow to compare the toxicity threshold, the accumulation of Cu and mechanisms of toxicity of both compounds. Acute and chronic exposures showed a higher bioaccumulation of Cu in the gills, and a higher toxicity of CuPT than that of ionic Cu2+, e.g. mortality , transcription levels of genes related to oxidative stress, detoxification and Cu transport. Intriguingly, the activities of enzymatic biomarkers used as proxy of antioxidant capacity were not significantly altered, although Cu is generally expected to trigger oxidative stress. In conlusion, this study brings new knowledge pointing that the presence of CuPT in the environment could induce toxic effects in non-target species. Moreover, it support the need to study in detail the toxicity of Cu-based paints to adapt regulations concerning their use and release in aquatic environments. Because of its low solubility in water, CuPT is expected to adsorb to suspended matter and food pellets. Future research should study this route of exposure.
References Bourdon, C., Cachot, J., Gonzalez, P., Couture, P., 2023. Characterization of the bioaccumulation and toxicity of copper pyrithione, an antifouling compound, on juveniles of rainbow trout, bioRxiv ver. 3 peer-reviewed and recommended by Peer Community in Ecotoxicology and Environmental Chemistry. https://doi.org/10.1101/2023.01.31.526498 Li, X., S. Ru, H. Tian, S. Zhang, Z. Lin, M. Gao and J. Wang, 2021. Combined exposure to environmentally relevant copper and 2,2′-dithiobis-pyridine induces significant reproductive toxicity in male guppy (Poecilia reticulata). Science of the Total Environment 797, https://doi.org/10.1016/j.scitotenv.2021.149131 Mochida, K., Amano, H., Onduka, T., Kakuno, A., Fujii, K., 2011. Toxicity and metabolism of copper pyrithione and its degradation product, 2,2’-dipyridyldisulfide in a marine polychaete. Chemosphere 82, 390–397, https://doi.org/10.1016/j.chemosphere.2010.09.074 Mohamat-Yusuff, F., Sarah-Nabila, Ab.G., Zulkifli, S.Z., Azmai, M.N.A., Ibrahim, W.N.W., Yusof, S., Ismail, A., 2018. Acute toxicity test of copper pyrithione on Javanese medaka and the behavioural stress symptoms. Marine Pollution Bulletin 127, 150–153, https://doi.org/10.1016/j.marpolbul.2017.11.046 Shin, D., Y. Choi, Z. Y. Soon, M. Kim, D. J. Kim and J. H. Jung, 2022. Comparative toxicity study of waterborne two booster biocides (CuPT and ZnPT) on embryonic flounder (Paralichthys olivaceus). Ecotoxicology and Environmental Safety 233, https://doi.org/10.1016/j.ecoenv.2022.113337 | Characterization of the bioaccumulation and toxicity of copper pyrithione, an antifouling compound, on juveniles of rainbow trout | Charlotte Bourdon, Jérôme Cachot, Patrice Gonzalez, Patrice Couture | <p>Since the global ban on tributyltin in antifouling paints in 2008 by the International Maritime Organization, new products have been developed and brought to the market. Among them, copper pyrithione (CuPT) is used, but its mechanisms of toxici... | ![]() | Aquatic ecotoxicology, Bioassays, Biomarkers, Biomonitoring, Biotransformation, Environmental pollution | Claudia Cosio | Elise David, Anne-Sophie Voisin | 2023-02-01 15:23:44 | View |
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